Weekly Reading List: June 2, 2025

Weekly Reading List: June 2, 2025

Rare ‘ambidextrous’ protein breaks rules of handedness
Most proteins are left-handed, but scientists have found an ancient molecule that works in both mirror-image forms.
European Sperm Donor Passes on Cancer Predisposition Variant to at Least 23 Children
A donor to a European sperm bank has transmitted a likely pathogenic variant for Li-Fraumeni syndrome, a genetic condition that predisposes carriers to a variety of cancers, to almost two dozen children he fathered, of whom 10 have developed cancer so far.
At ASCO 2025, attendees see reason for hope, despite worries
Like a Las Vegas buffet, ASCO offers a diverse bounty of clinical data.
Prioritizing disease-associated missense variants with chemoproteomic-detected amino acids
Missense variants are the most common type of protein-altering genetic variation. Due to their wide-ranging potential functional consequences, missense variants are challenging to interpret and, as a result, are often classified as unknown pathogenicity or as variants of uncertain significance (VUSs). Genomic-based predictive tools have made significant inroads into the challenge of accurately pinpointing functional missense variants by providing genome-wide assessments of deleteriousness or potential pathogenicity. Complementary to these tools, here we provide an initial study into the utility of harnessing protein-based measures of amino acid reactivity to delineate functionally significant missense variants. These reactivity measurements, which are generated using mass spectrometry-based chemoproteomic methods, have already proved capable of pinpointing functional sites on proteins, which provide the added value of delineating potential sites suitable for drug-development efforts.
Epigenome-wide DNA methylation association study of CHIP provides insight into perturbed gene regulation - Nature Communications
In CHIP, somatic mutations in a hematopoietic stem cell lead to a clonal subpopulation of blood cells. Here, the authors perform a CHIP meta-EWAS to establish its epigenetic features and age-related outcomes.
Accurate HBA and SMN genotyping within an integrated NGS workflow: A step toward accessible carrier screening
Here, we present updated versions of SMN and HBA targeted callers, released in DRAGEN v4.4, as well as a spike-in panel that can be used to supplement the Illumina DNA Prep with Exome 2.5 Enrichment panel to allow for accurate HBA and SMN genotyping on Illumina exomes.
Hologic Shares Spike 15 Percent on Reports of $16B Offer to Go Private
Shares of Hologic jumped 15 percent on Tuesday following a report that the company had rejected an offer totaling more than $16 billion to take it private.
Cancer-fighting immune cells could soon be engineered inside our bodies
Manufacturing CAR T cells in the laboratory is expensive and time-consuming. An in vivo approach could get the powerful therapy to more people.
Drug-induced liver injuries rise in the U.S. as supplements grow in popularity: What to know
Most people who take dietary or herbal supplements do so on their own, not under a doctor’s advice.
Former FDA commissioner: ‘Cost-cutting’ may undo one of Trump’s best drug pricing achievements
The recent dismissal of 13 FDA review staff eliminated precisely the kind of government spending that delivered the most bang for the taxpayers’ buck, writes former FDA Commissioner Scott Gottlieb.
The ‘pivot penalty’: scientists get cited less after switching fields, analysis finds
Massive study of nearly 26 million research papers measures the consequences of striking out in another research area.
Caris Life Sciences Files for IPO
Caris Life Sciences said late Friday that it has filed a registration statement with the US Securities and Exchange Commission for an initial public offering.
Illumina unveils PromoterAI, a groundbreaking algorithm to accelerate insights for rare disease diagnosis
Expansion in situ genome sequencing links nuclear abnormalities to aberrant chromatin regulation
Microscopy and genomics are used to characterize cell function, but approaches to connect the two types of information are lacking, particularly at subnuclear resolution. Here, we describe expansion in situ genome sequencing (ExIGS), a technology that enables sequencing of genomic DNA and superresolution localization of nuclear proteins in single cells. Applying ExIGS to progeria-derived fibroblasts revealed that lamin abnormalities are linked to hotspots of aberrant chromatin regulation that may erode cell identity. Lamin was found to generally repress transcription, suggesting variation in nuclear morphology may affect gene regulation across tissues and aged cells. These results demonstrate that ExIGS may serve as a generalizable platform to link nuclear abnormalities to gene regulation, offering insights into disease mechanisms.
Patient dies in trial of Rocket gene therapy for heart condition
The FDA has placed a clinical hold on the study while Rocket works with trial monitors and experts to investigate the cause of the patient’s death.
udicial Invalidation of the FDA’s Laboratory-Developed Test Rule — Legal and Public Health Consequences
Recently, a federal judge struck down an FDA rule on laboratory-developed tests. If this invalidation stands, it will have consequences for clinical care and the FDA’s authority over medical devices.
Immunotherapy drug doubles cancer survival in breakthrough trial
An international study found immunotherapy before surgery could give patients extra years of life.
Scientists have lost their jobs or grants in US cuts. Foreign universities want to hire them
As the Trump administration cut billions of dollars in federal funding to scientific research, thousands of scientists in the U.S. lost their jobs or grants.
Beyond Genes: Human Exposome Project to Tackle External Drivers of Disease
The Human Genome Project began more than 30 years ago, creating a reference map that has since transformed the understanding of how genes contribute to health and disease. Now, the Human Exposome Project seeks to uncover how the complete range of environmental factors shapes health.
Étienne-Émile Baulieu, French scientist who invented abortion pill, dies aged 98
Doctor whose discovery helped create mifepristone was ‘guided by his commitment to progress made possible by science’
25 million cavities and $9.8 billion: Study estimates the costs of removing fluoride from water
Researchers estimated 7.5% more U.S. children would get cavities, affecting 25.4 million additional teeth, if fluoridation were banned nationwide
Black Death bacterium has become less lethal after genetic tweak
Reducing the number of copies of one gene in the pathogen could also make it more transmissible.
The organ farm
Gene-edited pig kidneys are finally moving the long-stymied field of xenotransplantation forward